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Review Article| Volume 154, P156-166, February 2023

A scoping review finds that guides to authors of protocols for observational epidemiological studies varied highly in format and content

  • Daniel Malmsiø
    Correspondence
    Corresponding author. University of Southern Denmark, Syddansk Universitet, Landbrugsvej 85, 4, 5260 Odense S, Denmark. Tel.: +4540555836.
    Affiliations
    Department of Clinical Research, University of Southern Denmark, Centre for Evidence-Based Medicine Odense (CEBMO) and Cochrane Denmark, Odense, Denmark

    Odense University Hospital, Open Patient Data Exploratory Network (OPEN), Odense, Denmark
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  • Anders Frost
    Affiliations
    Department of Clinical Research, University of Southern Denmark, Centre for Evidence-Based Medicine Odense (CEBMO) and Cochrane Denmark, Odense, Denmark

    Odense University Hospital, Open Patient Data Exploratory Network (OPEN), Odense, Denmark
    Search for articles by this author
  • Asbjørn Hróbjartsson
    Affiliations
    Department of Clinical Research, University of Southern Denmark, Centre for Evidence-Based Medicine Odense (CEBMO) and Cochrane Denmark, Odense, Denmark

    Odense University Hospital, Open Patient Data Exploratory Network (OPEN), Odense, Denmark
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Open AccessPublished:December 19, 2022DOI:https://doi.org/10.1016/j.jclinepi.2022.12.012

      Highlights

      • We identified 39 guides for authors of protocols for observational epidemiological studies.
      • The content and format of the guides varied considerably, and the developmental process behind the guides was often not reported or sparsely reported.
      • We suggest that guides for authors of protocols for observational epidemiological studies should routinely be based on a systematic preparatory process.

      Abstract

      Objective

      To identify, characterize, and explore author guides on the role, format, and content of protocols for observational epidemiological studies, particularly cohort and case-control studies.

      Study Design and Setting

      Scoping review. We searched for guides in Medline, Embase, Google Scholar, 10 general medical and epidemiological/public health journals, and 10 major funders’ websites. Two review authors extracted data. We classified guides as “main” based on word count and number of protocol items, described such guides more comprehensively and analyzed number of citations as an indicator of uptake.

      Results

      Thirty-nine protocol guides were included intended for cohort studies (n = 3), case-control studies (n = 1), or epidemiological studies in general (n = 35). Content and format were highly variable. Several guides had a broader focus than protocol development, e.g., also including study conduct and reporting. The guideline developmental process was often reported sparsely. One guide, intended for interventional studies, combined a systematic preparatory process with a primary focus on protocol development. We categorized seven guides as ‘main’. In general the guides were cited infrequently, indicating limited uptake.

      Conclusion

      Guides for authors of protocols for observational epidemiological studies varied highly in format and content. We suggest that such guides should routinely be based on a systematic preparatory process.

      Keywords

      What is new?

        Key findings

      • We identified 39 guides for authors of protocols for observational epidemiological studies.
      • The content and format of the guides varied considerably. Most guides addressed general epidemiological studies, and most did not focus exclusively on protocol development. Only one guide was highly cited, and this was a book on case-control studies, where the role of the protocol was a tangential aspect.
      • The reporting of the guideline’s development process was often absent or sparse.

        What this adds to what was known?

      • There exist several guides for authors of protocols for observational epidemiological studies, but they vary in content and format, are generally not cited often, and the development process is rarely described in detail.

        What is the implication and what should change?

      • We suggest that guides of protocols for observational epidemiological studies should be based on a systematic preparatory process.

      1. Introduction

      The protocol for a research study is important as it is the core document for the scientific and practical planning of a study, as well as a foundation for its conduct, analysis, and reporting. When publicly available the study protocol can be used for appraisal, allowing others to evaluate the relevance and reliability of the planned study [
      • Chan A.-W.
      • Tetzlaff J.M.
      • Altman D.G.
      • Laupacis A.
      • Gøtzsche P.C.
      • Krleža-Jerić K.
      • et al.
      SPIRIT 2013 statement: defining standard protocol items for clinical trials.
      ].
      Public availability of a study protocol is especially important in the context of risk of selective reporting of outcomes, also known as p-hacking, data mining, cherry picking, or data dredging [
      • HARKing Andrade C.
      • Cherry-Picking
      • P-Hacking
      Fishing expeditions, and data dredging and mining as questionable research practices.
      ]. Selective reporting of “positive results” and selective nonreporting of “negative results” poses a major threat to the reliability of research results [
      • Chan A.W.
      • Hróbjartsson A.
      • Haahr M.T.
      • Gøtzsche P.C.
      • Altman D.G.
      Empirical evidence for selective reporting of outcomes in randomized trials: comparison of protocols to published articles.
      ,
      • Dwan K.
      • Gamble C.
      • Williamson P.R.
      • Kirkham J.J.
      Systematic review of the empirical evidence of study publication bias and outcome reporting bias - an updated review.
      ,
      • Dwan K.
      • Altman D.G.
      • Clarke M.
      • Gamble C.
      • Higgins J.P.
      • Sterne J.A.
      • et al.
      Evidence for the selective reporting of analyses and discrepancies in clinical trials: a systematic review of cohort studies of clinical trials.
      ], increases research waste [
      • Chalmers I.
      • Glasziou P.
      Avoidable waste in the production and reporting of research evidence.
      ], and undermines the credibility of the scientific process. Public availability of a study protocol and its analysis plan provides an incentive for researchers to adhere to the plan and provides interested parties with the opportunity to directly compare the published results of a study with its planned analyses, either informally or as part of a formal assessment of risk of bias in studies included in a systematic review [
      • Chan A.W.
      • Hróbjartsson A.
      Promoting public access to clinical trial protocols: challenges and recommendations.
      ,
      • Altman D.G.
      • Furberg C.D.
      • Grimshaw J.M.
      • Rothwell P.M.
      Lead editorial: trials - using the opportunities of electronic publishing to improve the reporting of randomised trials.
      ,
      • Sterne J.A.C.
      • Savović J.
      • Page M.J.
      • Elbers R.G.
      • Blencowe N.S.
      • Boutron I.
      • et al.
      RoB 2: a revised tool for assessing risk of bias in randomised trials.
      ].
      Selective outcome reporting within a study is closely related to selective publication of entire studies (i.e., publication bias), often combined in the overarching concept of reporting bias [
      • Higgins J.P.T.T.J.
      • Chandler J.
      • Cumpston M.
      • Li T.
      • Page M.J.
      • Welch V.A.
      editors Reporting Biases: Cochrane; 2022.
      ]. Trial registries, e.g., ClinicalTrials.gov, provide an incentive for publication of registered “negative” studies, and provide interested parties with an opportunity to identify (e.g., in the context of a systematic review) registered but unpublished studies. The information on outcomes and analysis provided in trial registries overlaps to some degree with the full analysis plan of a protocol but will typically be incomplete [
      • Weber W.E.
      • Merino J.G.
      • Loder E.
      Trial registration 10 years on.
      ].
      Study protocols, and selective outcome reporting, have not been investigated much within observational epidemiology [
      European Center for Ecotoxicology and Toxicology of Chemicals
      Enhancement of the scientific process and transparency of observational epidemiology studies.
      ]. There has been little tradition for publishing protocols, though that may slowly be changing. Historically, there has been little consensus on whether publicly available protocols and study registration should be encouraged [
      European Center for Ecotoxicology and Toxicology of Chemicals
      Enhancement of the scientific process and transparency of observational epidemiology studies.
      ]. Some have argued that public availability of the analysis plan will reduce risk of selective outcome reporting [
      • Peat G.
      • Riley R.D.
      • Croft P.
      • Morley K.I.
      • Kyzas P.A.
      • Moons K.G.
      • et al.
      Improving the transparency of prognosis research: the role of reporting, data sharing, registration, and protocols.
      ], and that study registration will mitigate risk of publication bias [
      European Center for Ecotoxicology and Toxicology of Chemicals
      Enhancement of the scientific process and transparency of observational epidemiology studies.
      ,
      • Peat G.
      • Riley R.D.
      • Croft P.
      • Morley K.I.
      • Kyzas P.A.
      • Moons K.G.
      • et al.
      Improving the transparency of prognosis research: the role of reporting, data sharing, registration, and protocols.
      ,
      • Loder E.
      • Groves T.
      • MacAuley D.
      Registration of observational studies.
      ,
      • Hemingway H.
      • Riley R.D.
      • Altman D.G.
      Ten steps towards improving prognosis research.
      ,
      • Dal-Ré R.
      • Ioannidis J.P.
      • Bracken M.B.
      • Buffler P.A.
      • Chan A.-W.
      • Franco E.L.
      • et al.
      Making prospective registration of observational research a reality.
      ]. Others have argued that public availability of protocols and study registration will create a new layer of bureaucracy, which would needlessly take up resources, and that researchers will lack flexibility in their analysis due to the fear of being labeled data dredgers [
      • Lash T.L.
      • Vandenbroucke J.P.
      Should preregistration of epidemiologic study protocols become compulsory? Reflections and a counterproposal.
      ]. There is also a case for emphasizing the difference between randomized trials, where data can be collected in a structured way and fitted to a predefined analysis framework, and observational epidemiological studies, where data often are collected in a less structured way, and data analysis may need to be more interactive [
      • Lash T.L.
      • Vandenbroucke J.P.
      Should preregistration of epidemiologic study protocols become compulsory? Reflections and a counterproposal.
      ,
      The Editors
      The registration of observational studies--when metaphors go bad.
      ].
      It seems important to reduce risk of selective outcome reporting also in observational epidemiological studies, while keeping in mind the uniqueness of such studies. A relevant basis for this quest is to explore the role, format, and content of protocols in observational epidemiology, including any guidance provided to protocol authors. We have found no review of such guidance.
      We therefore thought it interesting to identify, characterize, and explore author guides on the role, format, and content of protocols for observational epidemiological studies–particularly cohort and case-control studies. Further, we also wanted to describe in more detail the specific guidance on analysis plan, registration, and public availability of protocols.

      2. Methods

      2.1 Type of review

      A scoping review [
      • Munn Z.
      • Pollock D.
      • Khalil H.
      • Alexander L.
      • McLnerney P.
      • Godfrey C.M.
      • et al.
      What are scoping reviews? Providing a formal definition of scoping reviews as a type of evidence synthesis.
      ].

      2.2 Definition

      Following “A Dictionary of Epidemiology” [
      • Porta M.
      A dictionary of epidemiology; United Kingdom.
      ] we defined observational epidemiological studies as those that involve: “the use of epidemiological reasoning, knowledge, and methods in studies that are nonexperimental. Epidemiological studies and programs (e.g., surveillance) in which main conditions (e.g., exposure) are not under the direct control of the researcher.” Such studies include, e.g., cohort, case-control, or cross-sectional studies, as well as interrupted time series or controlled before after studies. According to this definition observational epidemiological studies can investigate effects of exposure as well as interventions. Randomized trials fall outside this definition, because they are experimental in nature (though they may be regarded epidemiological in a broad sense).

      2.3 Eligibility criteria

      We included guides that made suggestions on the role, format, or content of observational epidemiological study protocols. We included guides in any format, e.g., guidelines, sections in textbooks, journal articles, or sections on journal websites or funder websites. Guides in any language and with any publication year were eligible.
      If a guide solely contained short remarks (i.e., one or two lines) it was excluded. We also excluded guides that provided guidance for randomized controlled trials or simply were not specified for epidemiological studies, i.e., generic protocol guidance.

      2.4 Search strategy and information sources

      We searched Medline, Embase, and Google Scholar. We also searched websites of the top 10 funders of health research based on their annual budget [
      • Viergever R.F.
      • Hendriks T.C.C.
      The 10 largest public and philanthropic funders of health research in the world: what they fund and how they distribute their funds.
      ], and the top 10 general medical journals and the top 10 epidemiology/public health journals ranked according to 2020 Web of Science Journal Impact Factor (see Appendix A). All journals and funders were contacted by e-mail.
      In a full-text search (i.e., Google Scholar) the first 100 hits were systematically screened. Additionally, a snowball search–a search of the references, of forward citation (meaning a search of the articles that have cited the included document), and similar articles–of all included guides were performed. One reviewer (D.M.) screened title and abstract for eligibility, followed by a full-text review of eligibility. The citations were managed with Endnote X9 and screened through Covidence.

      2.5 Data extraction

      We extracted basic descriptive information from each guide: title, authors, publication year, country, journal, document type (e.g., book or article), study type (cohort or case-control, other study types were labeled general epidemiological studies), aim, context of guidance, funding/conflict of interest. We extracted data on whether the primary focus of the guide was protocols or whether some other focus was primary, e.g., general epidemiological guidance; whether the guidance was for reporting of the protocol or guidance on the content of the protocol; and any information on development process.
      We extracted ad verbatim quotes from author guides on the role, format, and content of protocols, with special emphasis on analysis plan, registration, and public availability of protocols. The extraction was done independently by two authors (D.M. and A.F.) with a third (A.H.) serving as an arbiter.

      2.6 Categorization and analysis

      Based on the extracted information, we categorized the guides into recommendation, checklist, or template. A guide was categorized as recommendation if it used regular prose, as checklist if it provided a list of items to include in the protocol, and as template if it provided blank spaces to be filled in, accompanied by some guidance. We analyzed citations (both total and per year) using Google Scholar (dated November 2022) and checked whether protocol format and content in guides were based on a systematic preparatory development process following a defined methodology that included, e.g., synthesis of previous guides (search procedures, findings, and synthesis process); a Delphi process (or other broad consultation with stakeholders); and a face-to-face meeting (in person or online).
      We categorized the guides according to a standardized system of protocol items. These protocol items were derived from the Standard Protocol Items: Recommendations for Interventional Trials (SPIRIT) checklist [
      • Chan A.-W.
      • Tetzlaff J.M.
      • Gøtzsche P.C.
      • Altman D.G.
      • Mann H.
      • Berlin J.A.
      • et al.
      SPIRIT 2013 explanation and elaboration: guidance for protocols of clinical trials.
      ] and from the Strengthening the Reporting of Observational studies in Epidemiology reporting guideline [
      • Cuschieri S.
      The STROBE guidelines.
      ] for items unique to observational epidemiological studies.
      We sorted the guides into two groups–main and not-main–based on length (≥1500 words) and protocol items (i.e., number of protocol items ≥18). Then we characterized the main guides in more detail.
      Finally, we noted if guide characteristics differed according to publication platform (e.g., book, website, or articles).

      2.7 Reporting, conduct, and protocol

      The reporting of this review followed the Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) extension for scoping reviews [
      • Tricco A.C.
      • Lillie E.
      • Zarin W.
      • O'Brien K.K.
      • Colquhoun H.
      • Levac D.
      • et al.
      PRISMA extension for scoping reviews (PRISMA-ScR): checklist and explanation.
      ] and the conduct adheres to the Joanna Briggs Institute's guide for scoping reviews [
      • Peters MDJ G.C.
      • McInerney P.
      • Munn Z.
      • Tricco A.C.
      • Khalil H.
      Chapter 11: scoping reviews: JBI manual for evidence synthesis.
      ]. The study protocol can be found in Appendix H.

      3. Results

      3.1 Search

      The search in Medline, Embase, and Google Scholar resulted in 30 included guides. The websites of top 10 medical journals, top 10 epidemiological journals, and top 10 funders resulted in two inclusions; 22 of 30 responded to our e-mail without providing any new inclusions. Lastly, a snowball search of all the included guides resulted in another seven guides included, resulting in a final inclusion of 39 guides (Fig. 1). The Google Scholar search identified all websites, all books, and some articles; the Medline, Embase, website, and snowball search identified only articles.
      Figure thumbnail gr1
      Fig. 1Flowchart of records, documents, and included guides.

      3.2 Basic characterization of included guides

      The author guides were published from 1982 to 2022 (median publication year 2013), and eight (21%) guides were published from 2018 to 2022. The guides were categorized as recommendations (n = 28), templates (n = 8), and checklists (n = 3) (Table 1). The guides focused on different study types: cohort studies (n = 3), case-control studies (n = 1), and general epidemiological studies (n = 35). The general epidemiological studies were subdivided into generic epidemiological studies (n = 22), “pharmacoepidemiologic” studies (n = 7), “nonintervention” studies (n = 2), “cohort event monitoring” studies (n = 1) (i.e., a standard method of surveillance of newly approved drugs), and “observational intervention” studies (n = 3). Seventeen of the guides in the generic epidemiological category only specified that the guides were for “epidemiological” or “observational” studies; five guides, however, specified that cohort, case-control, and cross-sectional studies were examples of “observational” or “epidemiological” studies.
      Table 1Characterization of guides
      Guides
      Status as main guides was based on word count (≥1500) and protocol items addressed (≥18).
      Type
      Type of guidance provided by the guides: recommendation (recom.), template (temp.), or checklist (check.).
      FormatFocus
      Primary focus of the publication could be protocol (only) or general epidemiological research practices (including the protocol).
      Guidance
      Does the guide address the content or reporting of the observational epidemiological study protocol.
      Words
      Only words used in guidance on observational epidemiological protocol was counted.
      Citation
      Total number of citations to the publication with yearly citation in parathesis. n/a: not applicable, e.g., websites not included in Google Scholar.
      Protocol items
      Number of protocol items addressed by the document and percent (%) in parathesis (the protocol items were developed based on the SPIRIT guidelines for clinical trials protocols and the STROBE guideline for epidemiological studies).
      Main guides
       GE
      GE: General epidemiological consist of guides that are on epidemiology in general or guides for other study types than cohort and case-control studies.
      MCRI 2019 [
      Murdoch Children’s Research Institute
      Melbourne Children’s observational studies protocol template: notes to users.
      ]
      Temp.WebsiteProtocolContent11,540n/a26 (100)
      Andrews 2016 [
      • Andrews E.
      • Arellano F.
      • Avorn J.
      • Bortnichak E.
      • Chen R.
      • Dai W.
      • et al.
      Guidelines for good pharmacoepidemiology practice (GPP).
      ]
      Recom.ArticleOtherContent1821118 (24)23 (88)
      Philadelphia 2020 [
      Children's Hospital of Philadelphia. Protocol Templates.
      ]
      Temp.WebsiteProtocolContent7426n/a22 (85)
      WHO 2021 [
      World Health Organization
      Protocol template to be used as template for observational study protocols: cohort event monitoring (CEM) for safety signal detection after vaccination with COVID-19 vaccines: world Health Organization.
      ]
      Temp.WebsiteProtocolContent452911 (11)22 (85)
      Wang 2022 [
      • Wang S.V.
      • Pottegård A.
      • Crown W.
      • Arlett P.
      • Ashcroft D.M.
      • Benchimol E.I.
      • et al.
      HARmonized Protocol Template to Enhance Reproducibility of hypothesis evaluating real-world evidence studies on treatment effects: a good practices report of a joint ISPE/ISPOR task force.
      ]
      Temp.ArticleProtocolContent59630 (0)21 (81)
      Fronteira 2013 [
      • Fronteira I.
      How to design a (good) epidemiological observational study: epidemiological research protocol at a glance.
      ]
      Recom.ArticleProtocolContent22913 (1)18 (69)
      UCLH 2010 [
      Biomedical Research Unit: UCLH U, RFH
      Guidelines for completing a research protocol for observational studies.
      ]
      Recom.WebsiteProtocolContent1753n/a18 (69)
      Not main guides
       Cohorts
      Berger 2009 [
      • Berger M.L.
      • Mamdani M.
      • Atkins D.
      • Johnson M.L.
      Good research practices for comparative effectiveness research: defining, reporting and interpreting nonrandomized studies of treatment effects using secondary data sources: the ISPOR Good Research Practices for Retrospective Database Analysis Task Force Report--Part I.
      ]
      Recom.ArticleOtherContent338375 (31)14 (54)
      Berger 2012 [
      • Berger M.L.
      • Dreyer N.
      • Anderson F.
      • Towse A.
      • Sedrakyan A.
      • Normand S.L.
      Prospective observational studies to assess comparative effectiveness: the ISPOR good research practices task force report.
      ]
      Recom.ArticleOtherContent345217 (24)16 (62)
      Velentgas 2013 [
      • Velentgas P.
      • Dreyer N.A.
      • Nourjah P.
      • Smith S.R.
      • Torchia M.M.
      ]
      Recom.BookProtocolContent2433261 (33)10 (38)
       Case-control studies
      Schlesselman 1982 [
      • Schlesselman J.J.
      ]
      Check.BookOtherContent12065803 (149)14 (54)
       GE
      Alba 2020 [
      • Alba S.
      • Verdonck K.
      • Lenglet A.
      • Rumisha S.F.
      • Wienia M.
      • Teunissen I.
      • et al.
      Bridging research integrity and global health epidemiology (BRIDGE) statement: guidelines for good epidemiological practice.
      ]
      Recom.ArticleOtherContent171013 (7)17 (65)
      Alberta 2009 [
      University of Alberta
      Observational protocol template.
      ]
      Temp.WebsiteProtocolContent1387n/a15 (58)
      Ali 2013 [
      • Ali A.
      Template for Research Protocols in Advanced Epidemiology.
      ]
      Temp.WebsiteProtocolContent14320 (0)16 (62)
      Altpeter 2005 [
      • Altpeter E.
      • Burnand B.
      • Capkun G.
      • Carrel R.
      • Cerutti B.
      • Mäusezahl-Feuz M.
      • et al.
      Essentials of good epidemiological practice.
      ]
      Recom.ArticleOtherContent50925 (2)19 (73)
      Andrews 1996 [
      • Andrews E.A.
      • Avorn J.
      • Bortnichak E.A.
      • Chen R.
      • Dai W.S.
      • Dieck G.S.
      • et al.
      Guidelines for Good Epidemiology Practices for drug, device, and vaccine research in the United States.
      ]
      Recom.ArticleOtherContent85035 (1)20 (77)
      Bailey 1991 [
      The Chemical Manufacturers Association’s Epidemiology Task Group. Guidelines for Good Epidemiology Practices for Occupational and Environmental Epidemiologic Research. The Chemical Manufacturers Association’s Epidemiology Task Group.
      ]
      Recom.ArticleOtherContent77822 (1)20 (77)
      Bassel 2019 [
      • Bassel LS M.
      • Fernandes S.
      • Saragoussi D.
      Protocol Design in Real-World Evidence - The Indispensable Link Between Strategic Need and Study Execution.
      ]
      Recom.WebsiteProtocolContent9280 (0)18 (69)
      Botha & Yach 1987 [
      • Botha J.L.
      • Yach D.
      Epidemiological research methods. Part VI. Planning a research project.
      ]
      Recom.ArticleProtocolContent9523 (1)8 (31)
      Cafri & Paxton 2018 [
      • Guy C.
      Mitigating reporting bias in observational studies using covariate balancing methods.
      ]
      Recom.ArticleOtherContent5943 (1)4 (15)
      Cook 1991 [
      • Cook R.R.
      Overview of good epidemiologic practices.
      ]
      Recom.ArticleOtherContent114110 (3)14 (54)
      ECDC 2014 [
      European Centre for Disease Prevention and Control. Checklist for study protocols.
      ]
      Check.WebsiteProtocolContent445n/a14 (54)
      EMA 2012 [
      European Medicines Agency. Guidance for the format and content of the protocol of non-interventional post-authorisation safety studies.
      ]
      Recom.WebsiteProtocolContent9345 (1)20 (77)
      EMA 2017 []Recom.WebsiteOtherContent1259n/a19 (73)
      ENCePP 2018 [
      European Network of Centres for Pharmacoepidemiology and Pharmacovigilance. ENCePP Checklist for Study Protocols (Revision 4).
      ]
      Check.WebsiteProtocolContent98627 (3)18 (69)
      ENCePP 2020 [
      European Network of Centres for Pharmacoepidemiology and Pharmacovigilance. ENCePP Guide on Methodological Standards in Pharmacoepidemiology.
      ]
      Recom.WebsiteProtocolContent737n/a17 (65)
      FDA 2005 [
      US Food and Drug Administration
      Guidance for Industry - Good Pharmacovigilance Practices and Pharmacoepidemiologic Assessment.
      ]
      Recom.WebsiteOtherContent19115 (1)7 (26)
      FDA 2013 [
      US Food and Drug Administration
      Guidance for Industry and FDA Staff - Best Practices for Conducting and Reporting Pharmacoepidemiologic Safety Studies Using Electronic Healthcare Data.
      ]
      Recom.WebsiteOtherContent3251 (1)13 (50)
      Goldberg 2007 [
      • Goldberg M.
      • Leclerc A.
      • Lesieur S.
      • Ricordeau P.
      • Salmi R.
      • Sasco A.J.
      Recommendations for professional standards and good epidemiological practices (version France 2007).
      ]
      Recom.ArticleOtherContent13852 (1)18 (69)
      Goldin & Sayre 1996 [
      • Goldin J.
      • Sayre J.W.
      A guide to clinical epidemiology for radiologists: Part I study design and research methods.
      ]
      Recom.ArticleOtherContent52710 (1)12 (46)
      Goodman 2020 [
      • Goodman J.E.
      • Prueitt R.L.
      • Boffetta P.
      • Halsall C.
      • Sweetman A.
      Good Epidemiology Practice" Guidelines for Pesticide Exposure Assessment.
      ]
      Recom.ArticleOtherContent1164 (2)8 (31)
      Hoffmann 2019 [
      • Hoffmann W.
      • Latza U.
      • Baumeister S.E.
      • Brünger M.
      • Buttmann-Schweiger N.
      • Hardt J.
      • et al.
      Guidelines and recommendations for ensuring Good Epidemiological Practice (GEP): a guideline developed by the German Society for Epidemiology.
      ]
      Recom.ArticleOtherContent163971 (36)15 (58)
      Rosenthal 2014 [
      • Rosenthal R.
      • Schäfer J.
      • Briel M.
      • Bucher H.C.
      • Oertli D.
      • Dell-Kuster S.
      How to write a surgical clinical research protocol: literature review and practical guide.
      ]
      Recom.ArticleProtocolContent142515 (2)20 (77)
      Schnetzler 2012 [
      • Schnetzler G.
      • Hayward C.
      Overview of Guidelines and Recommendations for the Planning, Conduct and Reporting of Company-Sponsored Observational, Noninterventional Studies in Europe.
      ]
      Recom.ArticleOtherContent1551 (1)13 (50)
      Swaen 2018 [
      • Swaen G.M.H.
      • Langendam M.
      • Weyler J.
      • Burger H.
      • Siesling S.
      • Atsma W.J.
      • et al.
      Responsible Epidemiologic Research Practice: a guideline developed by a working group of the Netherlands Epidemiological Society.
      ]
      Recom.ArticleOtherContent36918 (6)13 (50)
      Sydney 2021 [
      Sydney - local health district. Research protocol (low risk or negligible risk (LNR)/retrospective data collection activities).
      ]
      Temp.WebsiteProtocolContent1478n/a21 (81)
      Vray 2000 [
      • Vray M.
      • Szafir D.
      • Jaillon P.
      [Pharmaco-epidemiology: identification of needs, databases, and study quality criteria].
      ]
      Recom.ArticleOtherContent1850 (0)7 (27)
      Wang 2021 [
      • Wang S.V.
      • Pinheiro S.
      • Hua W.
      • Arlett P.
      • Uyama Y.
      • Berlin J.A.
      • et al.
      STaRT-RWE: structured template for planning and reporting on the implementation of real world evidence studies.
      ]
      Temp.ArticleOtherReporting416155 (55)16 (62)
      Yang 2010 [
      • Yang W.
      • Zilov A.
      • Soewondo P.
      • Bech O.M.
      • Sekkal F.
      • Home P.D.
      Observational studies: going beyond the boundaries of randomized controlled trials.
      ]
      Recom.ArticleOtherContent178173 (16)9 (35)
      a Status as main guides was based on word count (≥1500) and protocol items addressed (≥18).
      b Type of guidance provided by the guides: recommendation (recom.), template (temp.), or checklist (check.).
      c Primary focus of the publication could be protocol (only) or general epidemiological research practices (including the protocol).
      d Does the guide address the content or reporting of the observational epidemiological study protocol.
      e Only words used in guidance on observational epidemiological protocol was counted.
      f Total number of citations to the publication with yearly citation in parathesis. n/a: not applicable, e.g., websites not included in Google Scholar.
      g Number of protocol items addressed by the document and percent (%) in parathesis (the protocol items were developed based on the SPIRIT guidelines for clinical trials protocols and the STROBE guideline for epidemiological studies).
      h GE: General epidemiological consist of guides that are on epidemiology in general or guides for other study types than cohort and case-control studies.
      Thirty-eight guides provided guidance on content while one provided guidance on reporting of protocols.
      Four guides had zero citations, eight guides were not citable (not included in Google Scholar), 18 guides were cited less than 10 times per year, nine guides were cited more than 10 times per year, and the most cited (and oldest) guide (Schlesselman 1982) [
      • Schlesselman J.J.
      ] was cited 149 times per year. The median number of total citations was 11 (interquartile range 2–35), and the median number of citations per year was 2 (interquartile range 1–16) (dated November 2022).

      3.3 Guides on role of study protocol

      Nineteen guides addressed the methodological role of protocols for observational epidemiological studies (see Appendix B). Several quotes indicated that the role of the protocol was “fundamental” to research, as a “road map” or “guide” for the researchers, and as designating an a priori hypothesis to prevent “data mining.” Though mostly the documents differed on which aspects of the role of the protocol they emphasized.

      3.4 Guides on format of study protocol

      Thirty-one guides addressed the order of items, being largely in agreement, though with some differences, mainly whether title, abstract, references, appendix, and registration should be included (see Appendix C). None provided guidance on the total length and only sporadically on the length of specific segments of the protocol.

      3.5 Guides on content of study protocol

      We developed 26 protocol items (Table 2). There was a high degree of variation on items between guides. The median of items per guide was 16 (interquartile range 13–20). The guide that addressed most protocol items was Murdoch Children's Research Institute (MCRI) 2019 (n = 26; 100%) and the guide that addressed fewest items was Cafri & Paxton 2018 (n = 4; 15%) (Table 1). Both “study design” and “analyses plan” were addressed in all guides (n = 39; 100%), and “access to data” was the least addressed protocol item (n = 6; 15%).
      Table 2Protocol items
      Protocol items
      Protocol items for observational epidemiological protocols were developed partly from SPIRIT guidelines for protocol items in randomized controlled trials and, for items unique to epidemiological studies, from the STROBE guideline.
      n (%)
      n was the absolute number of documents which addressed each item.
      Title17 (44)
      Study registration17 (44)
      Funding15 (38)
      Roles and responsibilities20 (51)
      Background and rationale35 (90)
      Specific objectives38 (97)
      Study design39 (100)
      Study setting18 (46)
      Eligibility criteria31 (79)
      Outcomes29 (74)
      Participant timeline28 (72)
      Sample size33 (85)
      Recruitment16 (41)
      Data collection31 (79)
      Data management29 (74)
      Analyses plan39 (100)
      Bias and confounding31 (79)
      Harms14 (36)
      Ethical considerations20 (51)
      Protocol amendments23 (59)
      Informed consent20 (51)
      Confidentiality17 (44)
      Declaration of interests10 (26)
      Access to data6 (15)
      Limitations19 (49)
      Dissemination and communication21 (54)
      a Protocol items for observational epidemiological protocols were developed partly from SPIRIT guidelines for protocol items in randomized controlled trials and, for items unique to epidemiological studies, from the STROBE guideline.
      b n was the absolute number of documents which addressed each item.

      3.6 Guides on analysis plan in study protocols

      We found some variation on the level of detail from a single sentence to more than 1000 words (see Appendix D). The rationale behind the text was similar: planned statistical analysis, power calculation, statistical software used, analysis of primary and secondary outcomes, strategy for confounders and effect modifiers, and how to deal with missing data.

      3.7 Guides on registration and public availability of study protocols

      We found quotes on study registration and public availability of protocols in thirteen guides (see Appendix E). Four of these explicitly endorsed public availability of protocols, whereas eleven mentioned and endorsed study registration. None of the documents advised against public availability of protocols or study registration. The reasons given were to enhance “transparency” and limiting “reporting bias” and “publication bias.”

      3.8 Characterization of main guides

      We characterized seven author guides as main: MCRI 2019 [
      Murdoch Children’s Research Institute
      Melbourne Children’s observational studies protocol template: notes to users.
      ], Andrews 2016 [
      • Andrews E.
      • Arellano F.
      • Avorn J.
      • Bortnichak E.
      • Chen R.
      • Dai W.
      • et al.
      Guidelines for good pharmacoepidemiology practice (GPP).
      ], Philadelphia 2020 [
      Children’s Hospital of Philadelphia. Protocol templates.
      ], World Health Organization 2021 [
      World Health Organization
      Protocol template to be used as template for observational study protocols: cohort event monitoring (CEM) for safety signal detection after vaccination with COVID-19 vaccines: world Health Organization.
      ], Wang 2022 [
      • Wang S.V.
      • Pottegård A.
      • Crown W.
      • Arlett P.
      • Ashcroft D.M.
      • Benchimol E.I.
      • et al.
      HARmonized Protocol Template to Enhance Reproducibility of hypothesis evaluating real-world evidence studies on treatment effects: a good practices report of a joint ISPE/ISPOR task force.
      ], Fronteira 2013 [
      • Fronteira I.
      How to design a (good) epidemiological observational study: epidemiological research protocol at a glance.
      ], University College London Hospitals 2010 [
      Biomedical Research Unit: UCLH U, RFH
      Guidelines for completing a research protocol for observational studies.
      ] (Table 3).
      Table 3Characteristics of main guides
      Status as main guides was based on word count (≥1500) and protocol items addressed (≥18).
      GuidesMCRI 2019Andrews 2016Philadelphia 2020WHO 2021Wang 2022Fronteira 2013UCLH 2010
      Guide typeTemplateRecommendationTemplateTemplateTemplateRecommendationRecommendation
      FormatWebsiteArticleWebsiteWebsiteArticleArticleWebsite
      Guide for study type
      Description of overall study type from the guide.
      “Observational study”“Pharmaco-epidemiological studies”“Observational study”“Cohort event monitoring study”Observational intervention studies (“Real-World Evidence”)“Epidemiological observational study”“Observational study”
      Examples of study sub-types
      Examples of observational epidemiological study subtypes explicitly mentioned in the guide.
      CohortCohortCohortNo subtype mentionedCohortCohortCohort
      Case-controlCase-controlCase-controlCase-controlCase-controlCase-control
      Cross-sectionalCross-sectionalCross-sectionalCross-sectionalCross-sectional
      Clinical areaPediatricsGeneralPediatricsCOVID-19GeneralGeneralGeneral
      Primary focus of publication
      Primary focus of the publication could be protocol (only) or general epidemiological research practices (including the protocol).
      ProtocolGood research practiceProtocolProtocolProtocolProtocolProtocol
      No. of protocol items
      Number of protocol items addressed by the document and percent (%) in parathesis (the protocol items were developed based on the SPIRIT guidelines for clinical trials protocols and the STROBE guideline for epidemiological studies).
      26 (100)23 (88)22 (85)22 (85)21 (81)18 (69)18 (69)
      No. of words
      The word count is based only on the part of the documents that contained guidance on the epidemiological study protocol.
      11.5401.8217.4264.52959632.2911.753
      No. of citations
      Total number of citations to the publication with yearly citation in parathesis. n/a: not applicable, e.g., websites not included in Google Scholar citations.
      n/a90 (18)n/a0 (0)0 (0)3 (1)n/a
      Country of originAustraliaInternationalUSAInternationalInternationalPortugalUK
      LanguageEnglishEnglishEnglishEnglishEnglishEnglish and PortugueseEnglish
      Initiated byMurdoch Children's Research InstituteInternational Society for Pharmaceutical EngineeringInstitutional Review Board at CHPWorld Health OrganizationISPE & ISPORSingle authorBiostatistics group at University College London
      CHP, children's hospital of philadelphia; ISPE, international society for pharmaceutical engineering; ISPOR, professional society for health economics and outcomes research; MCRI, murdoch children's research institute; UCLH, university college london hospitals; WHO, World Health Organization.
      a Status as main guides was based on word count (≥1500) and protocol items addressed (≥18).
      b Description of overall study type from the guide.
      c Examples of observational epidemiological study subtypes explicitly mentioned in the guide.
      d Primary focus of the publication could be protocol (only) or general epidemiological research practices (including the protocol).
      e Number of protocol items addressed by the document and percent (%) in parathesis (the protocol items were developed based on the SPIRIT guidelines for clinical trials protocols and the STROBE guideline for epidemiological studies).
      f The word count is based only on the part of the documents that contained guidance on the epidemiological study protocol.
      g Total number of citations to the publication with yearly citation in parathesis. n/a: not applicable, e.g., websites not included in Google Scholar citations.

      3.9 Systematic preparatory process

      The developmental process behind the guides was often reported sparsely and varied from some guides that were based on a full systematic preparatory process, e.g., Wang 2022, to guides that included some elements, e.g., Berger 2009 [
      • Berger M.L.
      • Mamdani M.
      • Atkins D.
      • Johnson M.L.
      Good research practices for comparative effectiveness research: defining, reporting and interpreting nonrandomized studies of treatment effects using secondary data sources: the ISPOR Good Research Practices for Retrospective Database Analysis Task Force Report--Part I.
      ], to guides that reported nothing on how they were developed (see Appendix F).

      3.10 Analysis of publication platform

      Guides published as articles, websites, and books had an average word count of 1247, 2357, and 1820, respectively, and an average number of protocol items of 15, 18, and 12, respectively.

      4. Discussion

      We identified 39 author guides on the role, format, and content of protocols for observational epidemiological studies. There was considerable variation between guides on format and which items they addressed, though with convergence on two items: study design and statistical methods. The reporting of the developmental process was often sparse. Only Wang 2022 [
      • Wang S.V.
      • Pottegård A.
      • Crown W.
      • Arlett P.
      • Ashcroft D.M.
      • Benchimol E.I.
      • et al.
      HARmonized Protocol Template to Enhance Reproducibility of hypothesis evaluating real-world evidence studies on treatment effects: a good practices report of a joint ISPE/ISPOR task force.
      ] combined a systematic preparatory process with a primary focus on protocol guidance. Most guides agreed that the protocol minimized the risk of selective outcome reporting, and four guides recommended public availability of protocols. We categorized seven guides as main.
      To our knowledge there are no previous published reviews of guides to authors of observational epidemiological study protocols. Halm et al. [
      • Halm A.
      • Moren A.
      • Valenciano M.
      Checklist for reviewing protocols of observational epidemiological studies.
      ] developed a checklist from a literature search in PubMed and on various websites. However, this checklist has not been peer-reviewed and the aim was to help reviewing epidemiological study protocols not authoring them.
      Tetzlaff et al. [
      • Tetzlaff J.M.
      • Chan A.-W.
      • Kitchen J.
      • Sampson M.
      • Tricco A.C.
      • Moher D.
      Guidelines for randomized clinical trial protocol content: a systematic review.
      ] conducted a systematic review of guidelines for randomized clinical trial protocol content. They found 40 eligible guidelines with a high degree of variation on items (called “concepts” in their review) with no guideline containing all items and very little consensus on items such as primary outcome, allocation concealment, conflicts of interest, and trial registration. This corresponds with our findings of variation between the author guides for observational epidemiological studies.
      There is an ongoing project, the Standardized Protocol Items Recommendations for Observational Studies, which aims to create a checklist for protocol reporting of cohort, case-control, and cross-section studies [
      • Mahajan R.
      • Burza S.
      • Bouter L.M.
      • Sijtsma K.
      • Knottnerus A.
      • Kleijnen J.
      • et al.
      Standardized protocol items recommendations for observational studies (SPIROS) for observational study protocol reporting guidelines: protocol for a Delphi study.
      ]. Besides the protocol no part of this project had been published as of November 2022.
      We performed a broad and sensitive search, and two authors performed the data extraction with a third serving as an arbiter. One author performed the search and screening, which may miss some relevant abstracts [
      • Gartlehner G.
      • Affengruber L.
      • Titscher V.
      • Noel-Storr A.
      • Dooley G.
      • Ballarini N.
      • et al.
      Single-reviewer abstract screening missed 13 percent of relevant studies: a crowd-based, randomized controlled trial.
      ], though the bulk of our included studies came through a full-text search. There is no consensus on how to search websites of journals and funders’, but since these guides need to be available for authors, a too complicated and prolonged website search would find guides that most authors probably would not.
      If an author to a protocol for an observational epidemiological study were to ask us for advice, we would recommend Wang 2022 [
      • Wang S.V.
      • Pottegård A.
      • Crown W.
      • Arlett P.
      • Ashcroft D.M.
      • Benchimol E.I.
      • et al.
      HARmonized Protocol Template to Enhance Reproducibility of hypothesis evaluating real-world evidence studies on treatment effects: a good practices report of a joint ISPE/ISPOR task force.
      ] for observational intervention studies, while emphasizing the subjective nature of such advice. We await publication of further guides based on a systematic preparatory development process aimed specifically for other subtypes of studies.
      We planned and categorized our review as a “scoping review”, as this is a term often used for reviews with a broad scope, and a descriptive and explorative nature. Alternative terms could have been “mapping review”, focusing more on the descriptive aspect [
      • Halm A.
      • Moren A.
      • Valenciano M.
      Checklist for reviewing protocols of observational epidemiological studies.
      ], or a “methodological” review, focusing on the methodological topic [
      • Tetzlaff J.M.
      • Chan A.-W.
      • Kitchen J.
      • Sampson M.
      • Tricco A.C.
      • Moher D.
      Guidelines for randomized clinical trial protocol content: a systematic review.
      ]. However, the terminology is fluid and seems to be still evolving.
      Moher et al. [
      • Moher D.
      • Schulz K.F.
      • Simera I.
      • Altman D.G.
      Guidance for developers of health research reporting guidelines.
      ] has published methods for developers of health research reporting guidelines (e.g., protocol reporting guidelines). The methods may be considered relevant, also for the development of protocol guides, and involved eight main steps: literature review, stakeholder identification, Delphi exercise, face-to-face meeting, consultation with stakeholders, developing guidance statement, dealing with feedback and criticism, and keeping the guideline up-to-date. Only Wang 2022 [
      • Wang S.V.
      • Pottegård A.
      • Crown W.
      • Arlett P.
      • Ashcroft D.M.
      • Benchimol E.I.
      • et al.
      HARmonized Protocol Template to Enhance Reproducibility of hypothesis evaluating real-world evidence studies on treatment effects: a good practices report of a joint ISPE/ISPOR task force.
      ] followed these or similar steps and had a primary focus on protocol development. There were, however, several useful guides with a comprehensive preparatory process, that we did not classify as ‘main’ guides, e.g., Wang 2021 [
      • Wang S.V.
      • Pinheiro S.
      • Hua W.
      • Arlett P.
      • Uyama Y.
      • Berlin J.A.
      • et al.
      STaRT-RWE: structured template for planning and reporting on the implementation of real world evidence studies.
      ] and Alba 2020 [
      • Alba S.
      • Verdonck K.
      • Lenglet A.
      • Rumisha S.F.
      • Wienia M.
      • Teunissen I.
      • et al.
      Bridging research integrity and global health epidemiology (BRIDGE) statement: guidelines for good epidemiological practice.
      ]. Their focus was broader than guiding specifically on protocols, e.g., Alba 2020 wanted “to develop good epidemiological practice guidelines specifically for global health epidemiology,” and only a minor part of this endeavor concerned the protocol.
      As of November 2022, the most frequently cited guide was Schlesselman 1982 [
      • Schlesselman J.J.
      ], which was a book that primarily focused on case-control study design, conduct, and analysis, and contained a brief checklist for protocols. Only one of the main guides was cited 10 times per year or more, Andrews 2016 [
      • Andrews E.
      • Arellano F.
      • Avorn J.
      • Bortnichak E.
      • Chen R.
      • Dai W.
      • et al.
      Guidelines for good pharmacoepidemiology practice (GPP).
      ] (24 citations per year), though two of the other main guides were published in 2021 [
      World Health Organization
      Protocol template to be used as template for observational study protocols: cohort event monitoring (CEM) for safety signal detection after vaccination with COVID-19 vaccines: world Health Organization.
      ] or 2022 [
      • Wang S.V.
      • Pottegård A.
      • Crown W.
      • Arlett P.
      • Ashcroft D.M.
      • Benchimol E.I.
      • et al.
      HARmonized Protocol Template to Enhance Reproducibility of hypothesis evaluating real-world evidence studies on treatment effects: a good practices report of a joint ISPE/ISPOR task force.
      ], with little time to accrue citations, and eight other guides were published on websites not included in Google Scholar's counts of citations [
      Murdoch Children’s Research Institute
      Melbourne Children’s observational studies protocol template: notes to users.
      ,
      Biomedical Research Unit: UCLH U, RFH
      Guidelines for completing a research protocol for observational studies.
      ,
      University of Alberta
      Observational protocol template.
      ,
      Sydney - local health district. Research protocol (low risk or negligible risk (LNR)/retrospective data collection activities).
      ,
      Children’s Hospital of Philadelphia. Protocol templates.
      ,
      European Centre for Disease Prevention and Control
      Checklist for study protocols.
      ,
      European Medicines Health
      Guidance for the format and content of the protocol of non-interventional post-authorisation safety studies.
      ,
      European Network of Centres for Pharmacoepidemiology and Pharmacovigilance
      ENCePP checklist for study protocols (revision 4).
      ]. In contrast the reporting guideline for randomized controlled trials protocols (SPIRIT 2013) has 4.446 citations with 556 citations per year [
      • Chan A.-W.
      • Tetzlaff J.M.
      • Altman D.G.
      • Laupacis A.
      • Gøtzsche P.C.
      • Krleža-Jerić K.
      • et al.
      SPIRIT 2013 statement: defining standard protocol items for clinical trials.
      ] and the reporting guideline for systematic reviews and meta-analyses protocols (PRISMA-P) has 9.125 citations with 1.621 citations per year [
      • Shamseer L.
      • Moher D.
      • Clarke M.
      • Ghersi D.
      • Liberati A.
      • Petticrew M.
      • et al.
      Preferred reporting items for systematic review and meta-analysis protocols (PRISMA-P) 2015: elaboration and explanation.
      ], indicating that these reporting guidelines are being used by authors. An important distinction, though, is that SPIRIT 2013 and PRISMA-P are protocol reporting guidelines, and not protocol content guidelines (only one of the included guides addressed reporting).
      The restricted general uptake of the guides, assessed by a low number of citations, calls for reflection. One reason could be the absence of a strong tradition within observational epidemiology to publish formal study protocols, in part reflected in the fact that observational epidemiological studies do not need to follow as strict standards and regulations as randomized trials [, ,
      • De Angelis C.
      • Drazen J.M.
      • Frizelle F.A.
      • Haug C.
      • Hoey J.
      • Horton R.
      • et al.
      Clinical trial registration: a statement from the international committee of medical journal editors.
      ]. Still, the number of published observational epidemiological study protocols has increased over time (a simple search in PubMed for “cohort OR case-control AND protocol” in title indicated a rise from 21 in 2010 to 314 in 2020). Also the number of observational studies registered at ClinicalTrials.gov has increased considerably (searches by study type and a specific year indicated 100% increase over 10 years from 3967 entries in 2010 to 8884 in 2020). Other possible factors are lack of awareness of the guides, a perception that such guides are not needed, or that they are not of the necessary quality. Interestingly, a substantial proportion (20%) of the guides we identified had been published recently (2018–2022), which could indicate an increased interest in the issue.
      One of the two protocol items that all guides included was analyses plan. This reflects the importance of the analyses in planning the study and in mitigating outcome reporting bias. Outcome reporting bias has been empirically demonstrated in randomized trials [
      • Chan A.W.
      • Hróbjartsson A.
      • Haahr M.T.
      • Gøtzsche P.C.
      • Altman D.G.
      Empirical evidence for selective reporting of outcomes in randomized trials: comparison of protocols to published articles.
      ], and there is little reason to believe that it is not prevalent in other types of epidemiological research. The regulatory constraints for randomized trials are stricter than for observational epidemiological studies, so the risk of outcome reporting bias in observational epidemiological studies could be higher, enhancing the need for publicly available protocols with detailed data analysis plans.
      One of the more puzzling yet recurring arguments against public availability of protocols and study registration has been that neither is necessary if there is an open access to data, where investigators share epidemiological data, study sample, data elements, and methods for data collection in a post publication registry [
      • Lash T.L.
      • Vandenbroucke J.P.
      Should preregistration of epidemiologic study protocols become compulsory? Reflections and a counterproposal.
      ]. However, it seems more implementable for editors and peer-reviewers to enforce a call for registration of studies, which is transparent to all stakeholders, as compared to enforcing post hoc data access, which comes with considerable logistical challenges as well as ethical concerns about patient data. Interestingly, “access to data” was the least used of all protocol items (n = 6). There has been a parallel debate in the psychological literature with similar arguments [
      • Nosek B.A.
      • Ebersole C.R.
      • DeHaven A.C.
      • Mellor D.T.
      The preregistration revolution.
      ].

      5. Conclusion

      We identified 39 guides to authors of protocols of observational epidemiological studies, of which seven were categorized as main guides. There was considerable variation between the guides on format and content. Only one author guide, intended for protocols for observational studies of interventions, combined a systematic preparatory process with a primary focus on protocol development. We suggest that guides for authors of protocols for observational epidemiological studies should routinely be based on a systematic preparatory process.

      Acknowledgments

      Thanks to Cecilia Ramlau-Hansen for providing valuable commenting on a preliminary version of the manuscript.

      Supplementary data

      References

        • Chan A.-W.
        • Tetzlaff J.M.
        • Altman D.G.
        • Laupacis A.
        • Gøtzsche P.C.
        • Krleža-Jerić K.
        • et al.
        SPIRIT 2013 statement: defining standard protocol items for clinical trials.
        Ann Intern Med. 2013; 158: 200-207
        • HARKing Andrade C.
        • Cherry-Picking
        • P-Hacking
        Fishing expeditions, and data dredging and mining as questionable research practices.
        J Clin Psychiatry. 2021; 82: 20f13804
        • Chan A.W.
        • Hróbjartsson A.
        • Haahr M.T.
        • Gøtzsche P.C.
        • Altman D.G.
        Empirical evidence for selective reporting of outcomes in randomized trials: comparison of protocols to published articles.
        JAMA. 2004; 291: 2457-2465
        • Dwan K.
        • Gamble C.
        • Williamson P.R.
        • Kirkham J.J.
        Systematic review of the empirical evidence of study publication bias and outcome reporting bias - an updated review.
        PLoS One. 2013; 8: e66844
        • Dwan K.
        • Altman D.G.
        • Clarke M.
        • Gamble C.
        • Higgins J.P.
        • Sterne J.A.
        • et al.
        Evidence for the selective reporting of analyses and discrepancies in clinical trials: a systematic review of cohort studies of clinical trials.
        PLoS Med. 2014; 11: e1001666
        • Chalmers I.
        • Glasziou P.
        Avoidable waste in the production and reporting of research evidence.
        Lancet. 2009; 374: 86-89
        • Chan A.W.
        • Hróbjartsson A.
        Promoting public access to clinical trial protocols: challenges and recommendations.
        Trials. 2018; 19: 116
        • Altman D.G.
        • Furberg C.D.
        • Grimshaw J.M.
        • Rothwell P.M.
        Lead editorial: trials - using the opportunities of electronic publishing to improve the reporting of randomised trials.
        Trials. 2006; 7: 6
        • Sterne J.A.C.
        • Savović J.
        • Page M.J.
        • Elbers R.G.
        • Blencowe N.S.
        • Boutron I.
        • et al.
        RoB 2: a revised tool for assessing risk of bias in randomised trials.
        BMJ. 2019; 366: l4898
        • Higgins J.P.T.T.J.
        • Chandler J.
        • Cumpston M.
        • Li T.
        • Page M.J.
        • Welch V.A.
        editors Reporting Biases: Cochrane; 2022.
        (Available at)
        • Weber W.E.
        • Merino J.G.
        • Loder E.
        Trial registration 10 years on.
        BMJ. 2015; 351: h3572
        • European Center for Ecotoxicology and Toxicology of Chemicals
        Enhancement of the scientific process and transparency of observational epidemiology studies.
        (Available at)
        • Peat G.
        • Riley R.D.
        • Croft P.
        • Morley K.I.
        • Kyzas P.A.
        • Moons K.G.
        • et al.
        Improving the transparency of prognosis research: the role of reporting, data sharing, registration, and protocols.
        PLoS Med. 2014; 11: e1001671
        • Loder E.
        • Groves T.
        • MacAuley D.
        Registration of observational studies.
        BMJ. 2010; 340: c950
        • Hemingway H.
        • Riley R.D.
        • Altman D.G.
        Ten steps towards improving prognosis research.
        BMJ. 2009; 339: b4184
        • Dal-Ré R.
        • Ioannidis J.P.
        • Bracken M.B.
        • Buffler P.A.
        • Chan A.-W.
        • Franco E.L.
        • et al.
        Making prospective registration of observational research a reality.
        Sci Transl Med. 2014; 6: 224cm1
        • Lash T.L.
        • Vandenbroucke J.P.
        Should preregistration of epidemiologic study protocols become compulsory? Reflections and a counterproposal.
        Epidemiology. 2012; 23: 184-188
        • The Editors
        The registration of observational studies--when metaphors go bad.
        Epidemiology. 2010; 21: 607-609
        • Munn Z.
        • Pollock D.
        • Khalil H.
        • Alexander L.
        • McLnerney P.
        • Godfrey C.M.
        • et al.
        What are scoping reviews? Providing a formal definition of scoping reviews as a type of evidence synthesis.
        JBI Evid Synth. 2022; 20: 950-952
        • Porta M.
        A dictionary of epidemiology; United Kingdom.
        Oxford University Press, 2016
        • Viergever R.F.
        • Hendriks T.C.C.
        The 10 largest public and philanthropic funders of health research in the world: what they fund and how they distribute their funds.
        Health Res Policy Syst. 2016; 14: 12
        • Chan A.-W.
        • Tetzlaff J.M.
        • Gøtzsche P.C.
        • Altman D.G.
        • Mann H.
        • Berlin J.A.
        • et al.
        SPIRIT 2013 explanation and elaboration: guidance for protocols of clinical trials.
        BMJ. 2013; 346: e7586
        • Cuschieri S.
        The STROBE guidelines.
        Saudi J Anaesth. 2019; 13: S31-S34
        • Tricco A.C.
        • Lillie E.
        • Zarin W.
        • O'Brien K.K.
        • Colquhoun H.
        • Levac D.
        • et al.
        PRISMA extension for scoping reviews (PRISMA-ScR): checklist and explanation.
        Ann Intern Med. 2018; 169: 467-473
        • Peters MDJ G.C.
        • McInerney P.
        • Munn Z.
        • Tricco A.C.
        • Khalil H.
        Chapter 11: scoping reviews: JBI manual for evidence synthesis.
        (Available at)
        https://synthesismanual.jbi.global
        Date: 2020
        Date accessed: September 24, 2022
        • Murdoch Children’s Research Institute
        Melbourne Children’s observational studies protocol template: notes to users.
        (Available at)
        • Andrews E.
        • Arellano F.
        • Avorn J.
        • Bortnichak E.
        • Chen R.
        • Dai W.
        • et al.
        Guidelines for good pharmacoepidemiology practice (GPP).
        Pharmacoepidemiol Drug Saf. 2016; 25: 2-10
      1. Children's Hospital of Philadelphia. Protocol Templates.
        (Available at)
        https://irb.research.chop.edu/protocol-templates
        Date: 2020
        Date accessed: January 14, 2022
        • World Health Organization
        Protocol template to be used as template for observational study protocols: cohort event monitoring (CEM) for safety signal detection after vaccination with COVID-19 vaccines: world Health Organization.
        (Available at)
        https://www.who.int/publications/i/item/9789240027398
        Date: 2021
        Date accessed: January 14, 2022
        • Wang S.V.
        • Pottegård A.
        • Crown W.
        • Arlett P.
        • Ashcroft D.M.
        • Benchimol E.I.
        • et al.
        HARmonized Protocol Template to Enhance Reproducibility of hypothesis evaluating real-world evidence studies on treatment effects: a good practices report of a joint ISPE/ISPOR task force.
        Value Health. 2022; 25: 1663-1672
        • Fronteira I.
        How to design a (good) epidemiological observational study: epidemiological research protocol at a glance.
        Acta Med Port. 2013; 26: 731-736
        • Biomedical Research Unit: UCLH U, RFH
        Guidelines for completing a research protocol for observational studies.
        (Available at)
        • Berger M.L.
        • Mamdani M.
        • Atkins D.
        • Johnson M.L.
        Good research practices for comparative effectiveness research: defining, reporting and interpreting nonrandomized studies of treatment effects using secondary data sources: the ISPOR Good Research Practices for Retrospective Database Analysis Task Force Report--Part I.
        Value Health. 2009; 12: 1044-1052
        • Berger M.L.
        • Dreyer N.
        • Anderson F.
        • Towse A.
        • Sedrakyan A.
        • Normand S.L.
        Prospective observational studies to assess comparative effectiveness: the ISPOR good research practices task force report.
        Value Health. 2012; 15: 217-230
        • Velentgas P.
        • Dreyer N.A.
        • Nourjah P.
        • Smith S.R.
        • Torchia M.M.
        Developing a Protocol for Observational Comparative Effectiveness Research: A User's Guide. AHRQ Publication, Rockville, MD2013 (Available at)
        • Schlesselman J.J.
        Case Control Studies: Design, Conduct, Analysis. Oxford University Press, United Kingdom1982: 354
        • Alba S.
        • Verdonck K.
        • Lenglet A.
        • Rumisha S.F.
        • Wienia M.
        • Teunissen I.
        • et al.
        Bridging research integrity and global health epidemiology (BRIDGE) statement: guidelines for good epidemiological practice.
        BMJ Glob Health. 2020; 5: e003236
        • University of Alberta
        Observational protocol template.
        (Available at)
        • Ali A.
        Template for Research Protocols in Advanced Epidemiology.
        (Available at)
        • Altpeter E.
        • Burnand B.
        • Capkun G.
        • Carrel R.
        • Cerutti B.
        • Mäusezahl-Feuz M.
        • et al.
        Essentials of good epidemiological practice.
        Soz Praventivmed. 2005; 50: 12-27
        • Andrews E.A.
        • Avorn J.
        • Bortnichak E.A.
        • Chen R.
        • Dai W.S.
        • Dieck G.S.
        • et al.
        Guidelines for Good Epidemiology Practices for drug, device, and vaccine research in the United States.
        Pharmacoepidemiol Drug Saf. 1996; 5: 333-338
      2. The Chemical Manufacturers Association’s Epidemiology Task Group. Guidelines for Good Epidemiology Practices for Occupational and Environmental Epidemiologic Research. The Chemical Manufacturers Association’s Epidemiology Task Group.
        J Occup Med. 1991; 33: 1221-1229
        • Bassel LS M.
        • Fernandes S.
        • Saragoussi D.
        Protocol Design in Real-World Evidence - The Indispensable Link Between Strategic Need and Study Execution.
        (Available at)
        • Botha J.L.
        • Yach D.
        Epidemiological research methods. Part VI. Planning a research project.
        S Afr Med J. 1987; 72: 563-566
        • Guy C.
        Mitigating reporting bias in observational studies using covariate balancing methods.
        Observ Stud. 2018; 4 (Project MUSE): 292
        • Cook R.R.
        Overview of good epidemiologic practices.
        J Occup Med. 1991; 33: 1216-1220
      3. European Centre for Disease Prevention and Control. Checklist for study protocols.
        (Available at)
      4. European Medicines Agency. Guidance for the format and content of the protocol of non-interventional post-authorisation safety studies.
        (Available at)
      5. European Medicines Health. Guideline on good pharmacovigilance practices (GVP).
        (Available at)
      6. European Network of Centres for Pharmacoepidemiology and Pharmacovigilance. ENCePP Checklist for Study Protocols (Revision 4).
        (Available at)
      7. European Network of Centres for Pharmacoepidemiology and Pharmacovigilance. ENCePP Guide on Methodological Standards in Pharmacoepidemiology.
        (Available at)
        • US Food and Drug Administration
        Guidance for Industry - Good Pharmacovigilance Practices and Pharmacoepidemiologic Assessment.
        (Available at)
        https://www.fda.gov/media/71546/download
        Date: 2005
        Date accessed: September 5, 2021
        • US Food and Drug Administration
        Guidance for Industry and FDA Staff - Best Practices for Conducting and Reporting Pharmacoepidemiologic Safety Studies Using Electronic Healthcare Data.
        (Available at)
        • Goldberg M.
        • Leclerc A.
        • Lesieur S.
        • Ricordeau P.
        • Salmi R.
        • Sasco A.J.
        Recommendations for professional standards and good epidemiological practices (version France 2007).
        Rev Epidemiol Sante Pub. 2008; 56: S121-S175
        • Goldin J.
        • Sayre J.W.
        A guide to clinical epidemiology for radiologists: Part I study design and research methods.
        Clin Radiol. 1996; 51: 313-316
        • Goodman J.E.
        • Prueitt R.L.
        • Boffetta P.
        • Halsall C.
        • Sweetman A.
        Good Epidemiology Practice" Guidelines for Pesticide Exposure Assessment.
        Int J Environ Res Pub Health. 2020; 17: 5114
        • Hoffmann W.
        • Latza U.
        • Baumeister S.E.
        • Brünger M.
        • Buttmann-Schweiger N.
        • Hardt J.
        • et al.
        Guidelines and recommendations for ensuring Good Epidemiological Practice (GEP): a guideline developed by the German Society for Epidemiology.
        Eur J Epidemiol. 2019; 34: 301-317
        • Rosenthal R.
        • Schäfer J.
        • Briel M.
        • Bucher H.C.
        • Oertli D.
        • Dell-Kuster S.
        How to write a surgical clinical research protocol: literature review and practical guide.
        Am J Surg. 2014; 207: 299-312
        • Schnetzler G.
        • Hayward C.
        Overview of Guidelines and Recommendations for the Planning, Conduct and Reporting of Company-Sponsored Observational, Noninterventional Studies in Europe.
        Pharmaceut Med. 2011; 25: 235-244
        • Swaen G.M.H.
        • Langendam M.
        • Weyler J.
        • Burger H.
        • Siesling S.
        • Atsma W.J.
        • et al.
        Responsible Epidemiologic Research Practice: a guideline developed by a working group of the Netherlands Epidemiological Society.
        J Clin Epidemiol. 2018; 100: 111-119
      8. Sydney - local health district. Research protocol (low risk or negligible risk (LNR)/retrospective data collection activities).
        (Available at)
        • Vray M.
        • Szafir D.
        • Jaillon P.
        [Pharmaco-epidemiology: identification of needs, databases, and study quality criteria].
        Therapie. 2001; 56: 349-353
        • Wang S.V.
        • Pinheiro S.
        • Hua W.
        • Arlett P.
        • Uyama Y.
        • Berlin J.A.
        • et al.
        STaRT-RWE: structured template for planning and reporting on the implementation of real world evidence studies.
        BMJ. 2021; 372: m4856
        • Yang W.
        • Zilov A.
        • Soewondo P.
        • Bech O.M.
        • Sekkal F.
        • Home P.D.
        Observational studies: going beyond the boundaries of randomized controlled trials.
        Diabetes Res Clin Pract. 2010; 88: S3-S9
      9. Children’s Hospital of Philadelphia. Protocol templates.
        (Available at)
        https://irb.research.chop.edu/protocol-templates
        Date: 2020
        Date accessed: January 14, 2022
        • Halm A.
        • Moren A.
        • Valenciano M.
        Checklist for reviewing protocols of observational epidemiological studies.
        (Available at)
        • Tetzlaff J.M.
        • Chan A.-W.
        • Kitchen J.
        • Sampson M.
        • Tricco A.C.
        • Moher D.
        Guidelines for randomized clinical trial protocol content: a systematic review.
        Syst Rev. 2012; 1: 43
        • Mahajan R.
        • Burza S.
        • Bouter L.M.
        • Sijtsma K.
        • Knottnerus A.
        • Kleijnen J.
        • et al.
        Standardized protocol items recommendations for observational studies (SPIROS) for observational study protocol reporting guidelines: protocol for a Delphi study.
        JMIR Res Protoc. 2020; 9: e17864
        • Gartlehner G.
        • Affengruber L.
        • Titscher V.
        • Noel-Storr A.
        • Dooley G.
        • Ballarini N.
        • et al.
        Single-reviewer abstract screening missed 13 percent of relevant studies: a crowd-based, randomized controlled trial.
        J Clin Epidemiol. 2020; 121: 20-28
        • Moher D.
        • Schulz K.F.
        • Simera I.
        • Altman D.G.
        Guidance for developers of health research reporting guidelines.
        PLoS Med. 2010; 7: e1000217
        • Wang S.V.
        • Pinheiro S.
        • Hua W.
        • Arlett P.
        • Uyama Y.
        • Berlin J.A.
        • et al.
        STaRT-RWE: structured template for planning and reporting on the implementation of real world evidence studies.
        BMJ. 2021; 372: m4856
        • European Centre for Disease Prevention and Control
        Checklist for study protocols.
        (Available at)
        • European Medicines Health
        Guidance for the format and content of the protocol of non-interventional post-authorisation safety studies.
        (Available at)
        • European Network of Centres for Pharmacoepidemiology and Pharmacovigilance
        ENCePP checklist for study protocols (revision 4).
        (Available at)
        • Shamseer L.
        • Moher D.
        • Clarke M.
        • Ghersi D.
        • Liberati A.
        • Petticrew M.
        • et al.
        Preferred reporting items for systematic review and meta-analysis protocols (PRISMA-P) 2015: elaboration and explanation.
        BMJ : Br Med J. 2015; 349: g7647
        • Food and Drug Administration
        FDA amendments act of 2007.
        (Available at)
        • World Medical Association
        Declaration of helsinki.
        (Available at)
        • De Angelis C.
        • Drazen J.M.
        • Frizelle F.A.
        • Haug C.
        • Hoey J.
        • Horton R.
        • et al.
        Clinical trial registration: a statement from the international committee of medical journal editors.
        New Engl J Med. 2004; 351: 1250-1251
        • Nosek B.A.
        • Ebersole C.R.
        • DeHaven A.C.
        • Mellor D.T.
        The preregistration revolution.
        Proc Natl Acad Sci. 2018; 115: 2600-2606